Paul C. Blainey: search on Z-Library

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1

ANCIENT MAYA MOSAIC MIRRORS: FUNCTION, SYMBOLISM, AND MEANING

Healy, Paul F., Blainey, Marc G.

Journal:

Ancient Mesoamerica

Year:

2011

Language:

english

File:

PDF, 1.67 MB

english, 2011

2

The future is now: single-cell genomics of bacteria and archaea

Blainey, Paul C.

Journal:

FEMS Microbiology Reviews

Year:

2013

Language:

english

File:

PDF, 881 KB

english, 2013

3

Genomic Analysis at the Single-Cell Level

Kalisky, Tomer, Blainey, Paul, Quake, Stephen R.

Journal:

Annual Review of Genetics

Year:

2011

Language:

english

File:

PDF, 205 KB

english, 2011

4

Points of Significance: Replication

Blainey, Paul, Krzywinski, Martin, Altman, Naomi

Journal:

Year:

2014

Language:

english

File:

PDF, 278 KB

english, 2014

5

Points of Significance: Nested designs

Krzywinski, Martin, Altman, Naomi, Blainey, Paul

Journal:

Year:

2014

Language:

english

File:

PDF, 317 KB

english, 2014

6

Combinatorial drug discovery in nanoliter droplets

Kulesa, Anthony, Kehe, Jared, Hurtado, Juan E., Tawde, Prianca, Blainey, Paul C.

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 8.52 MB

english, 2018

7

Optofluidic Single-Cell Genome Amplification of Sub-micron Bacteria in the Ocean Subsurface

Landry, Zachary C., Vergin, Kevin, Mannenbach, Christopher, Block, Stephen, Yang, Qiao, Blainey, Paul, Carlson, Craig, Giovannoni, Stephen

Journal:

Frontiers in Microbiology

Year:

2018

Language:

english

File:

PDF, 4.15 MB

english, 2018

8

FTIR studies of intermolecular hydrogen bonding in halogenated ethanols

Paul C. Blainey, Philip J. Reid

Journal:

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy

Year:

2001

Language:

english

File:

PDF, 184 KB

english, 2001

9

Multiplexed single-molecule assay for enzymatic activity on flow-stretched DNA

Kim, Sangjin, Blainey, Paul C, Schroeder, Charles M, Xie, X Sunney

Journal:

Year:

2007

Language:

english

File:

PDF, 1.44 MB

english, 2007

10

Nonspecifically bound proteins spin while diffusing along DNA

Blainey, Paul C, Luo, Guobin, Kou, S C, Mangel, Walter F, Verdine, Gregory L, Bagchi, Biman, Xie, X Sunney

Journal:

Nature Structural and Molecular Biology

Year:

2009

Language:

english

File:

PDF, 571 KB

english, 2009

11

Digital PCR provides sensitive and absolute calibration for high throughput sequencing

Richard A White, Paul C Blainey, H Christina Fan, Stephen R Quake

Journal:

Year:

2009

Language:

english

File:

PDF, 807 KB

english, 2009

12

Correction: Digital PCR provides sensitive and absolute calibration for high throughput sequencing

Richard A White, Paul C Blainey, HChristina Fan, Stephen R Quake

Journal:

Year:

2009

Language:

english

File:

PDF, 128 KB

english, 2009

13

Optimal Estimation of the Diffusion Coefficient from Noisy Time-Series Measurements

Vestergaard, Christian L., Blainey, Paul, Xie, Xiaoliang Sunney, Flyvbjerg, Henrik

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 70 KB

english, 2010

14

Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage

Dodsworth, Jeremy A., Blainey, Paul C., Murugapiran, Senthil K., Swingley, Wesley D., Ross, Christian A., Tringe, Susannah G., Chain, Patrick S. G., Scholz, Matthew B., Lo, Chien-Chi, Raymond, Jason,

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 1.15 MB

english, 2013

15

Optimal Estimation of Diffusion Coefficients from Noisy Single-Particle Trajectories

Vestergaard, Christian L., Blainey, Paul, Flyvbjerg, Henrik

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 36 KB

english, 2013

16

Optimal estimation of diffusion coefficients from single-particle trajectories

Vestergaard, Christian L., Blainey, Paul C., Flyvbjerg, Henrik

Journal:

Physical Review E

Year:

2014

Language:

english

File:

PDF, 1.37 MB

english, 2014

17

Self-Encapsulation of Poly-2,7-fluorenes in a Dendrimer Matrix

Marsitzky, Dirk, Vestberg, Robert, Blainey, Paul, Tang, Beverly T., Hawker, Craig J., Carter, Kenneth R.

Journal:

Journal of the American Chemical Society

Year:

2001

Language:

english

File:

PDF, 134 KB

english, 2001

18

Dissecting genomic diversity, one cell at a time

Blainey, Paul C, Quake, Stephen R

Journal:

Year:

2013

Language:

english

File:

PDF, 328 KB

english, 2013

19

Diffusion Constant of a Nonspecifically Bound Protein Undergoing Curvilinear Motion along DNA †

Bagchi, Biman, Blainey, Paul C., Xie, X. Sunney

Journal:

Journal of Physical Chemistry B

Year:

2008

Language:

english

File:

PDF, 76 KB

english, 2008

20

Erratum: Dissecting genomic diversity, one cell at a time

Blainey, Paul C, Quake, Stephen R

Journal:

Year:

2014

Language:

english

File:

PDF, 104 KB

english, 2014

21

Points of Significance: Sampling distributions and the bootstrap

Kulesa, Anthony, Krzywinski, Martin, Blainey, Paul, Altman, Naomi

Journal:

Year:

2015

Language:

english

File:

PDF, 245 KB

english, 2015

22

Laser Microdissection of the Alveolar Duct Enables Single-Cell Genomic Analysis

Bennett, Robert D., Ysasi, Alexandra B., Belle, Janeil M., Wagner, Willi L., Konerding, Moritz A., Blainey, Paul C., Pyne, Saumyadipta, Mentzer, Steven J.

Journal:

Frontiers in Oncology

Year:

2014

Language:

english

File:

PDF, 2.46 MB

english, 2014

23

Tools for the Microbiome: Nano and Beyond

Biteen, Julie S., Blainey, Paul C., Cardon, Zoe G., Chun, Miyoung, Church, George M., Dorrestein, Pieter C., Fraser, Scott E., Gilbert, Jack A., Jansson, Janet K., Knight, Rob, Miller, Jeff F., Ozcan,

Journal:

Year:

2015

Language:

english

File:

PDF, 2.79 MB

english, 2015

24

A microfluidic platform enabling single-cell RNA-seq of multigenerational lineages

Kimmerling, Robert J., Lee Szeto, Gregory, Li, Jennifer W., Genshaft, Alex S., Kazer, Samuel W., Payer, Kristofor R., de Riba Borrajo, Jacob, Blainey, Paul C., Irvine, Darrell J., Shalek, Alex K., Man

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 824 KB

english, 2016

25

Molecular sled is an eleven-amino acid vehicle facilitating biochemical interactions via sliding components along DNA

Mangel, Walter F., McGrath, William J., Xiong, Kan, Graziano, Vito, Blainey, Paul C.

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 750 KB

english, 2016

26

Molecular sled sequences are common in mammalian proteins

Xiong, Kan, Blainey, Paul C.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 1.63 MB

english, 2016

27

Quantitative Multiplexed Super-Resolution Neuronal Synapse Imaging using DNA-Paint

Guo, Syuan-Ming, Veneziano, Remi, McConnell, Russell E., Agasti, Sarit, Gordonov, Simon, Kulesa, Tony, Gertler, Frank B., Blainey, Paul, Boyden, Ed, Yin, Peng, Bathe, Mark

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 44 KB

english, 2015

28

Virtual microfluidics for digital quantification and single-cell sequencing

Xu, Liyi, Brito, Ilana L, Alm, Eric J, Blainey, Paul C

Journal:

Year:

2016

Language:

english

File:

PDF, 1.09 MB

english, 2016

29

Sliding on DNA: From Peptides to Small Molecules

Xiong, Kan, Erwin, Graham S., Ansari, Aseem Z., Blainey, Paul C.

Journal:

Angewandte Chemie International Edition

Year:

2016

Language:

english

File:

PDF, 806 KB

english, 2016

30

Sliding on DNA: From Peptides to Small Molecules

Xiong, Kan, Erwin, Graham S., Ansari, Aseem Z., Blainey, Paul C.

Journal:

Angewandte Chemie

Year:

2016

Language:

english

File:

PDF, 735 KB

english, 2016

31

Funding: Interdisciplinary challenges

Blainey, Paul C.

Journal:

Nature Microbiology

Year:

2016

Language:

english

File:

PDF, 127 KB

english, 2016

32

High-throughput automated microfluidic sample preparation for accurate microbial genomics

Kim, Soohong, De Jonghe, Joachim, Kulesa, Anthony B., Feldman, David, Vatanen, Tommi, Bhattacharyya, Roby P., Berdy, Brittany, Gomez, James, Nolan, Jill, Epstein, Slava, Blainey, Paul C.

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 978 KB

english, 2017

33

Meeting report for the 1st skin microbiota workshop, boulder, CO October 15-16 2012

Jack A Gilbert,Madeleine Ball,Paul Blainey…

Journal:

Standards in Genomic Sciences

Year:

2014

Language:

english

File:

PDF, 286 KB

english, 2014

34

Simple Bulk Readout of Digital Nucleic Acid Quantification Assays

Morinishi, Leanna S., Blainey, Paul

Journal:

Journal of Visualized Experiments

Year:

2015

Language:

english

File:

PDF, 517 KB

english, 2015

35

A Simple, Robust, and High Throughput Single Molecule Flow Stretching Assay Implementation for Studying Transport of Molecules Along DNA

Xiong, Kan, Blainey, Paul C.

Journal:

Journal of Visualized Experiments

Year:

2017

Language:

english

File:

PDF, 314 KB

english, 2017

36

Trends in antibiotic susceptibility in Staphylococcus aureus in Boston, Massachusetts, 2000-2014

Kanjilal, Sanjat, Sater, Mohamad R. Abdul, Thayer, Maile, Lagoudas, Georgia K., Kim, Soohong, Blainey, Paul C., Grad, Yonatan H.

Journal:

Journal of Clinical Microbiology

Year:

2017

Language:

english

File:

PDF, 1.95 MB

english, 2017

37

Single-particle trajectories reveal two-state diffusion-kinetics of hOGG1 proteins on DNA

Vestergaard, Christian L, Blainey, Paul C, Flyvbjerg, Henrik

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 874 KB

english, 2018

38

Targeting individual cells by barcode in pooled sequence libraries

Ranu, Navpreet, Villani, Alexandra-Chloé, Hacohen, Nir, Blainey, Paul C

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 946 KB

english, 2018

39

Multiplexed enrichment and genomic profiling of peripheral blood cells reveal subset-specific immune signatures

Reyes, Miguel, Vickers, Dwayne, Billman, Kianna, Eisenhaure, Thomas, Hoover, Paul, Browne, Edward P., Rao, Deepak A., Hacohen, Nir, Blainey, Paul C.

Journal:

Science Advances

Year:

2019

File:

PDF, 3.12 MB

2019

40

A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation

Järvenpää, Marko, Sater, Mohamad R. Abdul, Lagoudas, Georgia K., Blainey, Paul C., Miller, Loren G., McKinnell, James A., Huang, Susan S., Grad, Yonatan H., Marttinen, Pekka, Kasson, Peter M

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 2.77 MB

english, 2019

41

Massively parallel screening of synthetic microbial communities

Kehe, Jared, Kulesa, Anthony, Ortiz, Anthony, Ackerman, Cheri M., Thakku, Sri Gowtham, Sellers, Daniel, Kuehn, Seppe, Gore, Jeff, Friedman, Jonathan, Blainey, Paul C.

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.34 MB

english, 2019

42

Multiplexed and high-throughput neuronal fluorescence imaging with diffusible probes

Guo, Syuan-Ming, Veneziano, Remi, Gordonov, Simon, Li, Li, Danielson, Eric, Perez de Arce, Karen, Park, Demian, Kulesa, Anthony B., Wamhoff, Eike-Christian, Blainey, Paul C., Boyden, Edward S., Cottre

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 8.69 MB

english, 2019

43

Multiplexed and high-throughput neuronal fluorescence imaging with diffusible probes

Guo, Syuan-Ming, Veneziano, Remi, Gordonov, Simon, Li, Li, Danielson, Eric, Perez de Arce, Karen, Park, Demian, Kulesa, Anthony B., Wamhoff, Eike-Christian, Blainey, Paul C., Boyden, Edward S., Cottre

Journal:

Nature Communications

Year:

2019

File:

PDF, 8.69 MB

2019

44

Simultaneous Profiling of Gene Expression and Chromatin Accessibility in Single Cells

Reyes, Miguel, Billman, Kianna, Hacohen, Nir, Blainey, Paul C.

Journal:

Advanced Biosystems

Year:

2019

Language:

english

File:

PDF, 946 KB

english, 2019

45

The Population Dynamics of Antibiotic Resistance in Staphylococcus aureus in Boston: A Return to Antibiotic Susceptibility

Kanjilal, Sanjat, Sater, Mohamad, Thayer, Maile, Lagoudas, Georgia, Kim, Soohong, Blainey, Paul, Grad, Yonatan H

Journal:

Open Forum Infectious Diseases

Year:

2017

Language:

english

File:

PDF, 281 KB

english, 2017

46

Simultaneous Profiling of Gene Expression and Chromatin Accessibility in Single Cells

Reyes, Miguel, Billman, Kianna, Hacohen, Nir, Blainey, Paul C.

Journal:

Advanced Biosystems

Year:

2019

File:

PDF, 946 KB

2019

47

1830. Single-cell Transcriptional Profiling Reveals an Immune Cell State Signature of Bacterial Sepsis

Reyes, Miguel, Bhattacharyya, Roby P, Filbin, Michael, Billman, Kianna, Eisenhaure, Thomas, Hung, Deborah T, Levy, Bruce, Baron, Rebecca, Blainey, Paul, Goldberg, Marcia B, Hacohen, Nir

Journal:

Open Forum Infectious Diseases

Year:

2019

File:

PDF, 593 KB

2019

48

Nucleic acid cleavage with a hyperthermophilic Cas9 from an uncultured Ignavibacterium

Schmidt, Stephanie Tzouanas, Yu, Feiqiao Brian, Blainey, Paul C., May, Andrew P., Quake, Stephen R.

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.05 MB

english, 2019

49

Author Correction: Nested designs

Krzywinski, Martin, Altman, Naomi, Blainey, Paul

Journal:

Year:

2020

File:

PDF, 482 KB

2020

50

A validated lineage-derived somatic truth data set enables benchmarking in cancer genome analysis

Shand, Megan, Soto, Jose, Lichtenstein, Lee, Benjamin, David, Farjoun, Yossi, Brody, Yehuda, Maruvka, Yosef, Blainey, Paul C., Banks, Eric

Journal:

Communications Biology

Year:

2020

File:

PDF, 1.96 MB

2020